Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  312  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101896118--101896204
24
3.5
24
69
14
61
52
2
3
41
1.31
101898997--101899106
41
2.8
41
83
6
140
28
5
31
34
1.80
101910204--101910270
28
2.5
26
81
9
80
37
0
4
58
1.19
101910204--101910270
27
2.5
27
83
7
82
37
0
4
58
1.19
101919837--101919877
18
2.2
19
87
12
59
29
21
0
48
1.50
101920509--101920565
15
3.7
16
79
9
73
49
8
1
40
1.44
101921890--101921938
22
2.2
23
85
3
64
36
4
6
53
1.45
101927434--101927478
5
9.0
5
80
0
54
15
20
0
64
1.29
101929490--101929550
22
2.8
22
80
2
61
68
6
6
18
1.33
101929642--101929758
3
38.7
3
70
14
62
56
1
7
34
1.38
101929758--101929789
16
2.0
16
93
0
55
50
6
21
21
1.71
101929892--101929934
16
2.8
15
86
6
59
62
0
6
30
1.21
101930029--101930059
3
10.0
3
93
6
53
67
0
0
32
0.91
101931117--101931202
44
2.0
43
84
6
111
25
29
15
30
1.96
101931256--101932228
205
4.9
204
88
6
1390
29
23
18
28
1.98
101931318--101932228
395
2.3
399
91
4
1491
29
23
18
28
1.98
101940225--101940274
15
3.5
14
79
15
50
42
8
24
26
1.82
101944079--101944139
22
2.8
22
80
2
61
68
6
6
18
1.33
101944231--101944341
3
36.7
3
70
15
59
56
1
7
34
1.37
101944341--101944372
16
2.0
16
93
0
55
50
6
21
21
1.71
101944476--101944518
16
2.8
15
86
6
59
62
0
6
30
1.21
101944615--101944640
13
2.0
13
100
0
52
69
0
0
30
0.89
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101944690--101944742
26
2.0
27
85
14
74
52
7
3
35
1.48
101944735--101944764
3
9.7
3
92
7
51
63
0
0
36
0.95
101950361--101950749
134
2.9
134
81
4
464
24
16
19
39
1.91
101955528--101955602
3
25.0
3
80
0
78
0
40
26
33
1.57
101959483--101959584
53
1.9
53
86
5
145
29
17
10
42
1.83
101984359--101984408
20
2.5
20
86
3
73
52
10
10
28
1.67
101984591--101984639
20
2.5
20
83
12
57
28
2
4
65
1.22
101986655--101986739
30
2.8
30
89
3
127
16
48
7
28
1.72
101987243--101987312
3
24.3
3
77
21
71
32
1
0
65
1.01
101987238--101987312
8
9.1
8
75
18
57
30
1
0
68
0.98
101987243--101987314
13
5.5
13
81
15
69
33
1
0
65
1.02
101987244--101987314
19
4.2
16
81
15
81
33
1
0
64
1.02
101987243--101987312
22
3.2
21
82
15
72
32
1
0
65
1.01
101987244--101987314
5
13.6
5
79
16
65
33
1
0
64
1.02
101997457--101998225
86
8.9
86
86
3
762
34
20
23
20
1.97
101997558--101997872
44
7.3
44
69
16
246
34
21
24
19
1.96
101997517--101997828
42
7.3
42
69
15
217
33
21
23
21
1.97
101997852--101998185
43
7.7
43
69
12
198
35
21
22
20
1.96
101997982--101998136
44
3.5
44
75
11
163
38
22
21
17
1.93
101998735--101998820
30
2.9
30
91
3
138
17
50
6
25
1.71
101998912--101999060
49
3.0
48
91
5
244
44
2
20
32
1.63
101998912--101999059
50
3.0
50
95
4
255
44
2
20
33
1.63
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
101999423--101999468
24
1.9
24
90
0
74
28
2
0
69
1.00
101999698--101999751
20
2.7
20
77
5
56
33
0
7
59
1.25
102000650--102000683
8
4.5
8
96
3
54
64
5
0
29
1.17
102000643--102000690
16
3.1
15
84
6
60
64
4
2
29
1.23
102000805--102000858
23
2.5
22
75
13
60
57
5
5
31
1.45
102000821--102000906
25
3.7
24
79
10
81
55
5
6
31
1.50
102000929--102001062
25
5.6
25
71
11
93
58
2
3
35
1.28
102000931--102001062
22
5.5
25
68
21
77
59
2
3
34
1.28
102001545--102001719
30
5.8
30
89
1
237
20
4
48
26
1.67
102002432--102002683
77
3.3
77
88
2
357
34
22
18
24
1.96
102002758--102002791
16
2.1
16
94
0
59
70
0
8
20
1.13
102002828--102003026
76
2.7
73
84
6
265
34
21
14
30
1.93
102002785--102003190
71
5.3
74
78
11
329
35
18
16
29
1.93
102002865--102003275
160
2.6
164
80
7
484
35
18
15
29
1.92
102002902--102003261
159
2.3
157
83
7
440
34
18
16
31
1.93
102003280--102003596
77
4.3
74
80
9
324
33
20
16
30
1.94
102003322--102003736
72
5.4
76
76
12
411
33
21
15
29
1.94
102003447--102003736
158
1.8
159
87
4
433
33
22
15
28
1.95
102003882--102004372
72
6.5
75
90
4
620
32
19
15
32
1.93
102003882--102004372
150
3.3
148
84
7
596
32
19
15
32
1.93
102004396--102004559
72
2.3
70
81
6
179
36
23
14
25
1.92
102012820--102012855
12
3.0
12
95
0
63
41
5
25
27
1.77
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102014431--102014478
16
3.1
15
90
6
69
64
2
2
31
1.16
102014427--102014478
8
6.5
8
82
8
61
65
1
1
30
1.14
102014426--102014482
24
2.4
24
79
5
71
64
1
3
29
1.20
102014592--102014645
23
2.5
22
75
13
60
57
5
5
31
1.45
102014608--102014693
25
3.7
24
79
10
81
55
5
6
31
1.50
102014682--102014750
31
2.3
31
82
5
79
60
2
4
31
1.31
102014709--102014767
25
2.4
25
79
0
73
59
0
3
37
1.14
102014711--102014787
23
3.2
23
74
10
66
55
2
5
36
1.36
102014781--102014852
22
3.2
22
74
16
60
58
2
2
36
1.27
102014807--102014852
25
1.9
25
86
8
69
60
0
4
34
1.16
102015332--102015506
30
5.8
30
88
1
228
21
4
48
26
1.68
102017256--102017293
20
1.9
20
88
0
58
15
26
26
31
1.96
102020114--102020164
16
3.5
14
82
10
59
56
3
0
39
1.18
102021379--102021691
125
2.5
125
87
1
430
38
18
15
27
1.91
102022243--102022290
25
1.9
25
86
0
69
64
2
4
29
1.23
102022513--102022574
24
2.7
22
80
11
72
59
1
11
27
1.41
102022913--102022949
17
2.2
17
100
0
74
21
0
48
29
1.50
102023150--102023231
20
4.2
19
78
17
69
24
2
29
43
1.67
102030838--102030905
35
2.0
35
82
2
84
33
5
10
50
1.61
102030846--102030913
35
1.9
35
81
0
82
35
5
11
47
1.65
102034809--102034871
30
2.1
31
84
3
83
42
1
7
47
1.42
102035957--102035994
17
2.2
17
90
0
58
63
0
0
36
0.95
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102035957--102035994
9
4.4
9
87
9
53
63
0
0
36
0.95
102038489--102038522
13
2.8
12
82
8
50
44
0
2
52
1.16
102044663--102044692
15
1.9
16
93
6
53
56
0
6
36
1.26
102045095--102045145
26
2.0
26
84
7
68
54
7
7
29
1.57
102050625--102050655
16
1.9
16
93
0
53
0
22
3
74
0.96
102053816--102053846
15
2.1
15
100
0
62
35
19
0
45
1.51
102056026--102056052
11
2.5
11
100
0
54
22
7
18
51
1.70
102057448--102057641
92
2.1
92
88
5
286
44
4
4
46
1.41
102057619--102057717
52
2.0
52
80
11
118
45
6
2
46
1.39
102057674--102057707
17
2.0
17
94
0
59
44
5
0
50
1.26
102057679--102057726
17
3.0
16
79
17
55
45
6
2
45
1.40
102057767--102057801
18
2.0
17
88
5
52
40
0
0
60
0.97
102057714--102057947
129
1.8
130
95
0
425
42
2
5
49
1.39
102057896--102057930
18
2.0
17
88
5
52
45
0
0
54
0.99
102057884--102058155
144
1.9
147
94
3
487
47
2
3
46
1.34
102058040--102058074
18
2.0
17
88
5
52
45
0
0
54
0.99
102058236--102058330
45
2.1
45
88
1
138
32
27
5
34
1.79
102058311--102058378
16
4.2
16
96
0
118
35
36
0
27
1.58
102077508--102077575
34
2.0
34
97
0
127
41
1
32
25
1.64
102080012--102080580
61
9.3
61
83
2
642
29
19
17
33
1.95
102081799--102081859
32
1.9
32
96
0
113
60
8
4
26
1.45
102083857--102083903
15
3.1
15
90
0
58
55
0
10
34
1.35
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
102083871--102083903
12
2.8
12
95
0
57
57
0
9
33
1.30
102085503--102085872
44
8.6
43
73
8
236
27
22
20
29
1.98
102085472--102085873
214
1.9
214
88
4
619
27
22
20
29
1.99
102098534--102098580
15
3.1
15
90
0
58
55
0
10
34
1.35
102098548--102098580
12
2.8
12
95
0
57
57
0
9
33
1.30
102102382--102102448
27
2.4
28
82
5
82
55
5
2
35
1.40
102110087--102110144
23
2.5
23
91
0
89
51
0
17
31
1.45
102111567--102111602
18
1.9
19
88
5
56
33
27
0
38
1.57
102112015--102112047
17
1.9
17
88
11
50
51
3
0
45
1.16
102112596--102112624
14
2.0
15
93
6
51
55
0
0
44
0.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352