Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Gbar_A11
Parameters: 2 7 7 80 10 50 1000
Length:  113101708

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   

This is table  327  of  352  ( 42160 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105733675--105733725
16
3.2
16
97
0
93
52
13
11
21
1.72
105738317--105738405
45
2.0
45
82
4
108
28
21
21
29
1.98
105738283--105739219
176
5.3
175
89
0
1401
30
22
19
27
1.98
105738554--105738647
43
2.2
44
82
5
111
34
23
14
27
1.94
105738730--105738825
43
2.2
44
85
5
124
32
22
17
27
1.97
105738751--105738843
43
2.2
43
78
7
100
30
23
18
27
1.98
105738837--105738933
45
2.2
45
84
3
124
27
22
20
28
1.99
105740852--105741023
91
1.9
88
82
3
209
38
15
10
34
1.82
105741111--105741165
28
2.0
28
89
7
85
63
0
0
36
0.95
105741105--105741181
29
2.7
29
80
11
95
59
2
3
33
1.29
105741358--105741436
35
2.2
35
82
6
97
31
5
2
60
1.31
105741532--105741717
89
2.1
88
90
5
288
31
10
22
36
1.88
105743379--105743593
111
1.9
112
80
2
245
34
13
20
31
1.91
105750175--105750304
12
10.5
12
70
14
52
30
10
0
58
1.32
105750170--105750209
21
1.9
21
90
10
64
25
12
0
62
1.30
105764218--105764251
16
2.1
16
88
0
50
50
14
17
17
1.79
105767051--105767091
21
2.0
21
90
0
64
29
21
29
19
1.98
105768997--105769030
16
2.1
16
88
0
50
50
14
17
17
1.79
105787476--105787548
31
2.3
32
81
4
87
17
17
12
52
1.75
105787948--105787998
23
2.1
23
82
13
59
52
1
3
41
1.31
105790748--105790799
26
2.0
26
84
3
68
11
7
7
73
1.26
105791633--105791687
22
2.4
22
78
9
56
32
5
7
54
1.51
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105798519--105798710
104
1.8
105
86
4
278
23
18
11
46
1.81
105799093--105799710
44
14.0
45
77
5
593
27
16
25
29
1.97
105799088--105799710
132
4.7
132
95
0
1088
27
16
25
30
1.97
105800659--105800712
27
2.0
26
85
3
72
11
11
7
70
1.34
105801545--105801599
22
2.4
22
78
9
56
32
5
7
54
1.51
105806123--105806147
2
12.5
2
100
0
50
48
0
0
52
1.00
105825588--105825627
19
2.1
19
85
0
53
77
0
5
17
0.94
105826091--105826301
3
68.7
3
69
15
87
60
2
8
28
1.38
105826093--105826218
11
11.8
11
71
19
58
62
2
5
29
1.30
105828270--105828317
5
9.0
5
82
17
53
77
2
0
20
0.88
105828264--105828319
23
2.4
22
85
14
69
73
1
0
25
0.93
105842304--105842351
11
4.4
11
76
10
53
50
27
2
20
1.60
105842296--105842338
22
2.0
22
86
4
61
53
25
2
18
1.56
105842304--105842351
22
2.2
22
88
7
71
50
27
2
20
1.60
105846778--105847640
44
19.2
44
68
14
235
29
25
16
28
1.97
105846778--105847064
132
2.2
132
92
0
493
27
25
16
30
1.96
105846778--105847100
132
2.4
132
88
1
414
29
24
16
30
1.96
105847338--105847712
43
8.7
43
76
10
329
29
26
16
27
1.97
105847329--105847717
132
3.0
132
96
3
702
29
26
16
27
1.97
105862629--105862663
16
2.2
16
89
0
52
42
8
0
48
1.33
105867804--105868446
3
215.3
3
65
15
169
28
7
4
60
1.42
105868215--105868260
17
2.7
18
87
12
62
26
4
2
67
1.21
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105868248--105868305
25
2.3
24
77
19
64
31
5
8
55
1.52
105872421--105872456
9
4.1
9
89
3
56
22
25
11
41
1.86
105880530--105880681
43
3.5
42
75
9
162
36
23
23
16
1.94
105880522--105881052
87
6.1
87
82
3
635
36
20
22
20
1.95
105880530--105881035
44
11.6
43
65
11
172
36
21
22
19
1.95
105880551--105881058
173
2.9
173
84
2
671
36
20
22
20
1.95
105880517--105881052
260
2.1
261
85
2
731
36
20
22
20
1.95
105880538--105881102
173
3.3
168
80
6
621
35
20
23
20
1.96
105881122--105881290
88
1.9
88
85
0
230
28
21
21
28
1.99
105881123--105881318
88
2.2
88
80
3
207
28
21
21
28
1.99
105886733--105886799
18
3.8
18
76
4
73
53
1
11
32
1.47
105886777--105886883
3
36.0
3
68
10
51
57
0
9
33
1.31
105887071--105887377
3
102.3
3
65
12
76
57
3
10
29
1.49
105887113--105887182
35
2.0
35
83
8
88
57
4
10
28
1.50
105887212--105887342
57
2.3
55
79
6
129
58
3
6
31
1.39
105887295--105887342
13
3.6
13
83
13
62
64
2
6
27
1.28
105887342--105887379
19
2.0
19
89
0
58
55
5
15
23
1.61
105887531--105887588
25
2.5
22
75
21
57
68
5
0
25
1.10
105888384--105888418
5
7.0
5
87
12
54
82
0
17
0
0.66
105888385--105888418
15
2.2
16
94
5
61
85
0
14
0
0.60
105889876--105889988
44
2.7
42
77
18
119
34
3
23
38
1.72
105890070--105890110
14
3.1
14
79
10
50
58
0
0
41
0.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105890068--105890202
58
2.4
55
86
5
180
52
2
0
43
1.21
105900186--105900284
44
2.2
44
78
7
103
28
23
18
30
1.97
105900279--105900726
44
10.2
44
62
14
147
26
23
22
28
1.99
105900334--105900586
133
1.9
133
83
1
328
26
23
21
29
1.99
105900570--105900707
43
3.2
43
65
15
111
27
24
20
27
1.99
105900448--105900743
88
3.4
88
93
0
484
27
23
21
27
1.99
105904724--105904772
19
2.5
20
80
6
57
40
12
20
26
1.87
105916726--105916754
2
14.5
2
100
0
58
51
0
0
48
1.00
105917067--105917112
21
2.2
20
84
3
65
56
2
0
41
1.11
105917124--105917176
19
2.7
20
79
5
63
58
5
5
30
1.44
105917144--105917213
28
2.5
28
85
2
95
55
4
7
32
1.46
105917253--105917307
21
2.7
20
77
5
56
29
3
1
65
1.20
105917455--105917496
9
4.7
9
80
11
50
21
2
0
76
0.90
105917455--105917495
19
2.1
19
90
4
64
19
2
0
78
0.87
105918385--105918419
2
18.0
2
88
5
54
51
0
0
48
1.00
105923875--105923932
11
5.2
11
76
12
55
63
1
0
34
1.04
105923868--105923959
34
2.9
32
81
12
93
58
3
0
38
1.14
105933400--105933433
18
1.9
17
88
5
50
52
11
11
23
1.70
105933421--105933512
6
15.3
6
69
13
55
51
13
16
19
1.77
105933910--105933950
20
2.0
20
86
9
57
41
29
12
17
1.85
105934001--105934083
27
3.1
26
84
5
94
34
21
21
21
1.96
105934310--105934448
27
5.1
27
87
0
179
25
20
19
34
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105934453--105934649
27
7.3
27
80
7
195
43
9
20
26
1.82
105934458--105934649
81
2.4
81
85
2
253
43
9
20
26
1.82
105934453--105934649
54
3.7
54
80
2
218
43
9
20
26
1.82
105934629--105934844
27
8.0
27
81
2
209
30
6
22
41
1.78
105934617--105934723
54
2.0
54
81
3
126
34
6
20
38
1.79
105934641--105934866
54
4.2
54
82
4
240
31
6
22
39
1.80
105934641--105934827
27
6.9
27
82
2
223
30
5
22
41
1.76
105934645--105934860
81
2.7
79
81
3
270
31
6
21
40
1.79
105940215--105940239
10
2.5
10
100
0
50
52
0
8
40
1.31
105941019--105941051
3
10.7
3
93
6
57
36
0
0
63
0.95
105940888--105941127
131
1.8
131
83
8
319
31
2
5
60
1.32
105941149--105941186
3
13.0
3
94
5
69
65
0
0
34
0.93
105941774--105941828
24
2.4
23
80
14
60
34
7
3
54
1.46
105941813--105941843
15
2.1
15
93
0
53
32
3
0
64
1.09
105943042--105943181
70
2.0
70
88
1
208
29
24
15
30
1.96
105950557--105950652
47
2.0
47
96
4
176
36
10
16
36
1.83
105958371--105958420
25
2.0
25
100
0
100
28
8
32
32
1.86
105958652--105959008
27
13.3
27
79
9
354
41
21
15
21
1.90
105958650--105959008
54
6.7
54
84
5
404
41
21
15
21
1.90
105958653--105959008
107
3.3
106
78
9
409
41
21
16
21
1.90
105962324--105962568
27
9.1
27
83
0
256
40
19
18
21
1.91
105962325--105962538
81
2.6
80
87
4
313
41
20
18
20
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
105962332--105962565
81
2.9
81
84
5
294
40
20
18
20
1.91
105965820--105966045
27
8.1
27
82
6
220
38
21
18
20
1.93
105965820--105966045
54
4.1
54
79
6
254
38
21
18
20
1.93
105971222--105971361
50
2.8
51
84
2
183
26
17
25
30
1.98
105976650--105976731
26
3.2
26
94
0
137
32
7
23
36
1.82
105978990--105979044
21
2.6
21
97
0
101
56
14
3
25
1.55
105980307--105980351
23
2.0
23
91
8
76
24
13
22
40
1.90
105996908--105996960
22
2.4
22
96
0
97
62
5
11
20
1.49
106001733--106001785
24
2.2
25
83
10
74
52
1
5
39
1.36
106001873--106001907
3
11.7
3
93
0
61
62
0
2
34
1.10

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352