Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167826.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36299135

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402   

This is table  20  of  402  ( 48166 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4604017--4604091
22
3.2
22
80
16
80
13
4
2
80
0.97
4604099--4604262
60
2.8
58
82
8
170
42
4
13
39
1.64
4607003--4607027
12
2.1
12
100
0
50
0
16
0
84
0.63
4607941--4607970
15
2.0
15
93
0
51
36
0
13
50
1.42
4608800--4608845
17
2.4
19
86
13
60
36
8
0
54
1.32
4608794--4608843
20
2.5
21
71
28
54
40
8
0
52
1.31
4627331--4627391
24
2.8
20
73
20
59
26
1
3
68
1.14
4627347--4627392
24
2.0
23
91
4
74
28
2
2
67
1.14
4631241--4631308
23
2.9
25
73
22
76
55
0
0
44
0.99
4631242--4631325
16
5.2
17
72
17
65
54
0
0
45
0.99
4631269--4631325
8
7.0
8
75
16
55
52
0
0
47
1.00
4631244--4631354
41
2.8
40
81
13
113
54
0
0
44
1.06
4633636--4633729
31
3.0
31
75
11
93
23
2
24
50
1.61
4633736--4633781
16
2.9
16
86
0
65
28
0
17
54
1.43
4633754--4634004
8
31.5
8
65
18
89
23
1
28
45
1.62
4633801--4633856
15
3.8
14
81
9
58
23
0
26
50
1.50
4633792--4633923
30
4.3
31
76
8
92
22
0
31
45
1.53
4636488--4636553
34
1.9
35
84
3
89
51
13
13
21
1.75
4636637--4636725
36
2.5
35
78
7
99
48
10
19
22
1.78
4636864--4637076
106
2.0
105
84
2
275
49
11
17
21
1.78
4637235--4637370
28
4.8
28
76
8
105
36
20
13
30
1.91
4637218--4637370
57
2.7
56
77
6
148
37
21
13
28
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4638226--4638693
231
2.0
231
91
0
758
28
18
8
45
1.78
4639938--4639974
13
2.8
13
91
4
56
2
18
5
72
1.15
4640415--4640446
9
3.8
9
88
12
50
6
0
9
84
0.78
4642233--4642352
40
3.1
37
77
16
93
41
8
14
35
1.75
4643487--4643512
13
2.0
13
100
0
52
76
0
0
23
0.78
4644825--4644872
15
3.1
15
84
3
60
25
4
25
45
1.71
4644898--4644967
15
4.6
16
82
12
85
14
1
30
54
1.49
4644885--4644969
45
1.9
44
88
7
127
16
2
29
51
1.57
4645649--4645697
9
5.4
9
79
16
57
22
0
4
73
1.00
4645644--4645697
17
3.1
16
80
17
63
20
1
3
74
1.07
4645875--4645911
14
2.7
15
88
12
53
64
0
0
35
0.94
4652145--4652170
6
4.3
6
100
0
52
0
34
30
34
1.58
4658266--4658345
41
2.0
41
82
0
97
36
23
18
21
1.95
4670315--4670533
110
2.0
105
94
4
384
33
14
21
30
1.93
4671307--4671348
22
1.9
22
90
0
66
16
9
11
61
1.55
4671431--4671479
15
3.3
15
80
5
55
14
2
22
61
1.43
4671504--4671537
12
2.8
12
90
0
50
29
11
17
41
1.85
4672070--4672103
2
17.0
2
100
0
68
50
0
0
50
1.00
4673209--4673258
18
2.8
18
78
6
57
6
46
0
48
1.27
4679406--4679469
30
2.2
29
81
8
76
51
3
3
42
1.33
4683765--4683805
4
10.5
4
85
15
59
21
2
0
75
0.92
4683860--4684404
58
9.2
57
80
8
434
47
5
9
36
1.61
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4683883--4684398
117
4.4
115
82
10
569
47
6
10
35
1.62
4683883--4684406
60
8.8
59
82
9
538
48
5
10
35
1.62
4686714--4686797
42
2.0
42
100
0
168
38
26
4
30
1.77
4689828--4690054
85
2.7
85
86
3
316
21
20
15
42
1.88
4690090--4690360
85
3.2
84
79
6
260
21
15
14
49
1.79
4690175--4690389
86
2.5
85
78
6
236
20
14
14
49
1.79
4691418--4691845
60
7.3
60
82
7
479
49
7
9
34
1.63
4691524--4691622
29
3.1
34
61
19
86
51
8
5
35
1.53
4691426--4691890
176
2.6
175
84
8
554
49
7
10
33
1.65
4691803--4691889
27
3.2
27
63
15
70
42
4
16
36
1.68
4691457--4691890
60
7.4
56
82
8
309
48
7
11
33
1.67
4693827--4693869
13
3.3
13
80
6
52
69
9
0
20
1.15
4693912--4693958
14
3.6
13
81
16
53
42
0
2
55
1.12
4694131--4694232
49
2.0
51
88
7
156
37
17
7
37
1.79
4695045--4695082
20
1.9
20
88
0
58
28
0
2
68
1.03
4695541--4695575
17
2.1
17
89
10
54
28
0
0
71
0.86
4696611--4696670
10
5.8
10
78
4
57
78
0
16
5
0.92
4696632--4696675
23
2.0
22
87
12
65
77
0
11
11
1.00
4696862--4697428
49
11.8
50
78
8
534
39
20
11
28
1.87
4698214--4698252
18
2.2
18
86
4
53
10
5
2
82
0.93
4709671--4709700
7
4.3
7
91
0
51
30
0
0
70
0.88
4709662--4709701
14
2.9
14
89
10
57
32
0
0
67
0.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4710730--4710769
12
3.3
12
82
0
53
77
0
10
12
0.99
4710762--4710793
3
10.7
3
93
0
55
65
0
3
31
1.08
4711660--4711711
20
2.5
20
79
14
61
59
0
1
38
1.08
4711723--4711748
6
4.3
6
100
0
52
15
0
0
84
0.62
4718591--4718630
18
2.2
19
86
4
55
50
0
20
30
1.49
4727557--4727614
30
2.1
27
81
12
64
50
1
10
37
1.47
4733784--4733821
10
3.8
10
89
6
51
34
0
5
60
1.19
4747172--4747211
2
20.0
2
100
0
80
50
0
0
50
1.00
4748527--4748566
17
2.2
19
86
8
57
45
7
5
42
1.54
4748626--4748651
3
8.7
3
100
0
52
69
0
0
30
0.89
4757694--4757751
22
2.9
19
76
14
62
63
0
0
36
0.94
4761433--4761476
9
4.8
9
78
15
54
54
6
6
31
1.53
4761458--4761497
20
2.0
21
85
5
55
50
7
0
42
1.30
4761542--4761601
29
2.1
29
87
6
88
63
5
0
31
1.16
4761747--4761807
32
1.9
32
83
6
79
65
8
1
24
1.29
4761833--4761883
20
2.5
21
83
3
68
39
1
1
56
1.22
4761845--4761911
21
3.1
21
77
8
73
29
1
2
65
1.16
4763192--4763266
24
3.1
23
73
7
69
37
5
4
53
1.43
4764242--4764326
10
8.3
10
78
8
73
56
8
0
35
1.29
4764242--4764326
41
2.1
41
84
0
107
56
8
0
35
1.29
4764241--4764326
11
8.3
11
75
17
67
56
8
0
34
1.29
4764243--4764326
20
4.2
20
78
6
89
55
8
0
35
1.30
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4764243--4764339
30
3.2
30
79
7
106
53
9
0
37
1.33
4764336--4764367
16
2.1
15
94
5
55
59
0
0
40
0.97
4764359--4764434
18
4.5
17
69
21
61
67
1
1
30
1.07
4764331--4764416
26
3.3
25
76
9
75
62
1
0
36
1.03
4764506--4764574
30
2.5
27
83
9
77
59
5
2
31
1.36
4764615--4764658
20
2.1
22
83
8
56
61
9
0
29
1.27
4764758--4764807
17
2.9
17
82
11
66
32
0
4
64
1.12
4764770--4764873
10
11.4
9
68
17
56
33
0
4
61
1.17
4764769--4764850
17
4.3
18
70
26
53
36
0
2
60
1.10
4764995--4765033
20
2.0
20
90
5
62
25
0
5
69
1.09
4765004--4765033
10
3.0
10
90
0
51
30
0
3
66
1.07
4765938--4765980
21
2.0
21
90
0
68
58
2
2
37
1.24
4766138--4766167
8
3.8
8
95
0
51
23
0
0
76
0.78
4767238--4767338
34
3.0
33
74
11
89
42
5
8
42
1.60
4767251--4767364
34
3.4
32
74
13
104
42
7
8
40
1.65
4768381--4768421
20
2.2
19
86
8
57
14
0
9
75
1.04
4768449--4768499
12
4.4
11
79
13
57
50
1
0
47
1.12
4768548--4768585
18
2.1
19
85
14
53
44
0
2
52
1.14
4770057--4770211
53
2.9
55
79
7
174
36
5
5
52
1.48
4773097--4773136
20
2.0
21
85
5
55
45
0
0
55
0.99
4787218--4787259
17
2.6
17
85
7
52
57
0
2
40
1.12
4787193--4787261
22
3.1
22
72
8
59
55
0
1
43
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4787314--4787352
12
3.2
12
83
16
53
66
0
0
33
0.92
4787775--4787816
22
1.9
22
85
0
57
47
2
7
42
1.43
4800761--4800817
29
2.0
29
96
0
105
49
8
15
26
1.74
4803847--4803886
19
2.1
19
85
0
53
25
10
12
52
1.70
4807770--4807803
15
2.3
15
90
10
52
35
0
0
64
0.94
4807768--4807807
16
2.4
17
84
16
57
35
0
0
65
0.93
4808606--4808640
16
2.2
16
89
0
52
51
2
5
40
1.40
4819284--4819345
30
2.1
30
84
0
79
54
0
1
43
1.09
4819317--4819351
18
1.9
18
88
0
52
57
0
2
40
1.14
4820099--4820132
14
2.5
14
90
4
52
41
0
5
52
1.25

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402