Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167826.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36299135

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402   

This is table  62  of  402  ( 48166 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10842288--10842340
26
2.0
26
88
0
79
32
28
13
26
1.93
10842406--10842846
159
2.8
158
74
4
438
18
25
29
25
1.98
10842974--10843026
26
2.0
26
85
0
70
30
30
16
22
1.96
10843051--10843503
159
2.9
159
80
5
558
16
27
32
24
1.96
10844586--10844638
26
2.0
26
88
0
79
26
22
18
32
1.97
10844612--10845113
158
3.2
158
78
7
586
18
27
30
23
1.98
10845087--10845139
26
2.0
26
89
7
81
28
24
18
28
1.98
10845945--10846087
77
1.9
77
85
2
198
14
27
25
32
1.95
10846974--10847026
26
2.0
26
88
0
79
28
26
20
24
1.99
10847316--10847368
26
2.0
26
92
0
88
28
28
18
24
1.98
10847880--10847932
26
2.0
26
88
0
79
30
28
15
26
1.96
10848406--10848458
26
2.0
26
88
0
79
26
24
20
28
1.99
10848466--10848763
159
1.9
158
82
2
382
20
25
30
23
1.99
10849112--10849164
26
2.0
26
96
0
97
26
28
20
24
1.99
10850017--10850069
26
2.0
26
92
0
88
26
26
20
26
1.99
10850681--10851029
155
2.2
156
78
5
375
19
25
29
24
1.98
10851002--10851054
26
2.0
26
92
7
90
26
24
20
28
1.99
10851211--10851263
26
2.0
26
92
0
88
28
28
18
24
1.98
10851395--10851447
26
2.0
26
89
7
81
26
22
20
30
1.98
10852072--10852590
159
3.3
157
74
8
408
20
26
28
25
1.99
10852564--10852616
26
2.0
26
92
7
90
26
24
20
28
1.99
10852839--10853143
159
1.9
158
86
3
434
17
25
32
24
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10853119--10853168
26
1.9
26
92
8
84
26
24
20
30
1.98
10855581--10855624
14
3.1
14
83
3
52
29
0
0
70
0.88
10855664--10855698
18
1.9
18
88
0
52
20
8
2
68
1.29
10856628--10856726
17
6.1
16
74
18
71
17
4
1
77
0.97
10856642--10856719
6
12.3
6
74
18
61
15
2
1
80
0.88
10856563--10856712
22
7.0
22
68
10
71
14
3
4
78
1.05
10856644--10856725
21
4.2
19
79
14
69
15
3
1
79
0.94
10856644--10856719
26
2.8
27
81
15
86
15
2
1
80
0.90
10856628--10856719
33
2.8
34
73
23
88
17
3
1
78
0.95
10856632--10856731
25
3.8
25
71
20
71
17
5
1
77
1.01
10856768--10856894
57
2.2
58
94
5
222
44
6
17
32
1.74
10857803--10858178
41
9.1
41
92
2
569
23
16
23
36
1.94
10857803--10858177
83
4.5
82
91
4
551
24
16
23
36
1.94
10857803--10858178
124
3.0
124
89
3
578
23
16
23
36
1.94
10858185--10858253
1
69.0
1
76
0
66
88
10
0
1
0.58
10858185--10858252
12
5.8
12
84
6
86
88
10
0
1
0.59
10858186--10858253
20
3.3
20
84
13
93
88
10
0
1
0.59
10858188--10858253
30
2.2
30
88
0
96
87
10
0
1
0.60
10858573--10858608
18
1.9
19
88
5
56
19
5
2
72
1.17
10859534--10859619
22
3.9
22
71
18
63
16
4
1
77
0.99
10859535--10859624
17
5.7
15
76
16
76
16
5
1
76
1.03
10859574--10859618
21
2.1
21
84
8
56
17
2
0
80
0.82
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10859627--10859920
57
5.0
57
85
8
376
45
8
12
33
1.72
10859953--10859986
6
5.7
6
92
0
50
17
2
8
70
1.25
10864680--10865250
157
3.6
157
75
4
542
17
28
30
23
1.97
10865130--10865493
195
1.9
195
84
2
498
20
26
28
24
1.99
10865919--10865971
26
2.0
26
89
7
81
26
22
20
30
1.98
10866297--10866714
158
2.6
159
76
3
439
16
28
30
24
1.96
10866593--10866956
195
1.9
195
84
2
498
20
26
28
24
1.99
10866908--10867408
158
3.2
159
73
10
375
19
27
29
23
1.98
10867384--10867434
26
2.0
26
88
7
77
29
21
17
31
1.96
10867756--10868176
159
2.7
159
77
5
433
17
28
29
23
1.97
10868524--10868590
23
3.0
22
89
4
107
31
23
16
28
1.96
10869006--10869057
25
2.0
26
85
10
72
26
26
19
26
1.99
10868847--10869216
183
2.0
185
84
2
476
20
25
28
24
1.99
10869399--10869761
159
2.3
157
79
5
399
20
27
30
21
1.98
10871849--10871898
26
1.9
26
87
0
73
24
24
22
30
1.99
10872319--10872374
26
2.2
26
86
0
76
26
21
19
32
1.97
10874068--10874120
26
2.0
26
96
0
97
26
28
20
24
1.99
10873910--10874279
184
2.0
184
82
2
447
21
28
28
22
1.99
10874411--10874463
26
2.0
26
92
7
90
26
22
20
30
1.98
10875131--10875183
26
2.0
26
96
0
97
26
24
20
28
1.99
10875208--10876123
159
5.8
159
78
3
844
17
27
31
22
1.97
10875273--10876122
316
2.7
317
83
1
1114
17
27
31
22
1.97
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10876096--10876148
26
2.0
26
92
7
90
26
24
20
28
1.99
10876866--10877305
159
2.8
160
79
6
477
19
28
29
22
1.98
10877277--10877329
26
2.0
26
89
7
81
28
24
18
28
1.98
10878184--10878236
26
2.0
26
92
0
88
28
28
18
24
1.98
10878525--10878577
26
2.0
26
92
7
90
26
24
20
28
1.99
10879256--10879306
26
2.0
26
92
7
86
27
27
15
29
1.96
10878808--10879861
560
1.9
553
82
6
1340
19
27
29
23
1.98
10879465--10879517
26
2.0
26
96
0
97
26
28
20
24
1.99
10879808--10879860
26
2.0
26
85
7
72
28
22
18
30
1.98
10880593--10881201
159
3.9
157
75
6
496
18
27
31
23
1.97
10881187--10881237
26
2.0
26
88
7
77
23
23
23
29
1.99
10882718--10883147
159
2.7
160
81
3
490
19
29
29
21
1.98
10883983--10884465
158
3.1
157
74
8
405
20
27
30
22
1.98
10884450--10884502
26
2.0
26
85
0
70
26
22
20
30
1.98
10885189--10885241
26
2.0
26
85
7
72
26
22
20
30
1.98
10885372--10885424
26
2.0
26
88
0
79
26
30
22
20
1.98
10885158--10885570
183
2.2
184
83
2
508
22
28
27
22
1.99
10885398--10885933
159
3.4
158
72
7
388
21
27
28
21
1.99
10885869--10886272
171
2.4
169
76
6
395
21
24
30
24
1.99
10885917--10886923
525
1.9
508
81
3
1067
20
24
30
24
1.98
10886373--10886425
26
2.0
26
85
7
72
28
24
18
28
1.98
10886714--10887242
159
3.3
159
79
7
585
19
25
30
24
1.98
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10887216--10887268
26
2.0
26
89
7
81
28
22
18
30
1.98
10889010--10889063
26
2.1
26
96
0
99
27
24
24
24
2.00
10890177--10890817
159
4.0
158
78
4
570
20
28
30
21
1.98
10890496--10890817
170
1.9
171
83
4
427
19
28
30
21
1.98
10891310--10891360
26
2.0
26
84
7
68
29
21
15
33
1.94
10892529--10892581
26
2.0
26
92
7
90
26
24
20
28
1.99
10894108--10894160
26
2.0
26
88
0
79
28
22
16
32
1.96
10892665--10894712
883
2.3
863
79
6
2138
20
27
28
23
1.99
10894474--10894529
26
2.2
26
90
6
87
30
25
17
26
1.97
10894856--10894907
26
2.0
26
88
7
79
26
23
19
30
1.98
10895574--10895626
26
2.0
26
92
0
88
28
28
18
24
1.98
10895600--10896103
159
3.2
158
77
4
408
19
27
28
23
1.98
10896076--10896128
26
2.0
26
88
0
79
26
24
18
30
1.98
10896444--10896495
25
2.0
26
85
3
70
30
23
19
26
1.98
10897581--10898083
159
3.2
156
77
7
438
19
26
30
23
1.98
10898057--10898109
26
2.0
26
85
7
72
30
24
16
28
1.97
10897636--10898824
514
2.3
511
85
2
1569
19
27
30
22
1.98
10898570--10898622
26
2.0
26
92
7
90
26
24
20
28
1.99
10898949--10899001
26
2.0
26
96
0
97
30
28
16
24
1.97
10904089--10904141
26
2.0
26
82
7
63
32
22
15
30
1.94
10904200--10904615
159
2.6
157
78
7
412
19
29
27
22
1.98
10904112--10904615
158
3.2
156
74
8
464
21
28
28
21
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10904591--10904641
26
2.0
26
92
7
86
29
25
15
29
1.96
10904980--10905478
157
3.2
155
74
7
457
18
25
31
24
1.98
10905452--10905504
26
2.0
26
85
7
72
26
24
20
28
1.99
10904055--10906082
862
2.3
864
81
4
2371
20
27
29
22
1.99
10906341--10906716
158
2.4
159
77
8
390
19
27
28
24
1.98
10906688--10906740
26
2.0
26
89
7
81
26
22
20
30
1.98
10907930--10907982
26
2.0
26
88
0
79
26
28
20
24
1.99
10906169--10909353
874
3.7
863
78
6
2749
20
26
29
23
1.99
10908094--10908457
158
2.3
158
81
6
423
19
27
30
22
1.98
10908431--10908483
26
2.0
26
85
7
72
26
24
20
28
1.99

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402