Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr06 132263754 
Parameters: 2 7 7 80 10 50 1000
Length:  132263754

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402   403   404   405   406   407   408   409   410   411   412   413   414   415   416   
          417   418   419   420   421   422   423   424   425   426   427   428   429   430   431   432   
          433   

This is table  106  of  433  ( 51894 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32431980--32432054
38
2.0
38
94
5
136
10
5
37
46
1.61
32432674--32432726
21
2.5
21
81
0
61
41
30
16
11
1.84
32432719--32432777
21
2.8
22
76
7
77
30
37
10
22
1.87
32433206--32433240
18
1.9
18
88
0
52
40
2
28
28
1.71
32436728--32436769
21
2.0
21
81
9
50
23
2
4
69
1.20
32436738--32436789
23
2.3
23
84
12
65
25
0
3
71
1.03
32438450--32438575
23
5.3
23
76
10
121
34
20
23
22
1.97
32438447--32438576
45
2.8
45
82
13
147
35
20
22
21
1.96
32440714--32441114
199
2.0
199
97
0
748
32
21
19
27
1.97
32444113--32444148
18
2.0
18
100
0
72
50
5
11
33
1.61
32444331--32444363
15
2.1
16
94
5
59
0
15
0
84
0.61
32452608--32452658
15
3.5
15
71
15
52
27
7
9
54
1.60
32458578--32458922
176
2.0
176
94
0
609
35
13
22
28
1.92
32461232--32461336
53
2.0
53
98
0
201
26
31
17
24
1.97
32466637--32466688
27
1.9
27
84
0
68
19
25
17
38
1.93
32474905--32475061
78
2.0
78
92
6
266
47
9
3
39
1.52
32482311--32482338
2
14.0
2
100
0
56
50
0
0
50
1.00
32483910--32484038
40
3.3
39
76
6
136
23
27
24
25
2.00
32491910--32492038
40
3.3
39
76
6
136
23
27
24
25
2.00
32497933--32498097
40
4.2
40
77
4
149
22
26
23
27
2.00
32511945--32512073
40
3.3
39
76
6
136
23
27
24
25
2.00
32517608--32517695
36
2.4
36
81
3
97
30
7
20
40
1.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32517644--32517695
18
2.9
18
79
0
59
28
7
21
42
1.80
32518312--32518415
51
2.0
51
83
3
129
33
7
15
43
1.75
32520199--32520330
69
1.9
69
85
3
185
21
23
17
37
1.94
32521326--32521362
20
1.9
18
89
10
56
37
2
5
54
1.38
32525067--32525192
39
3.2
38
90
2
189
26
28
21
23
1.99
32525029--32525192
78
2.1
78
83
5
199
26
28
21
23
1.99
32531211--32531317
40
2.7
40
92
1
169
28
29
23
18
1.98
32536778--32536967
29
6.6
29
85
2
240
25
32
16
25
1.96
32544093--32544166
29
2.6
29
88
0
94
25
33
16
24
1.95
32554405--32554574
46
3.7
45
70
12
128
28
21
27
22
1.99
32557911--32557957
21
2.1
21
84
11
58
53
2
8
36
1.44
32560602--32560628
14
1.9
14
100
0
54
44
0
3
51
1.19
32565859--32565898
15
2.7
14
85
11
53
12
2
0
85
0.71
32570300--32570340
5
8.4
5
89
10
59
14
2
0
82
0.76
32571126--32571176
25
2.0
25
100
0
102
41
0
27
31
1.56
32572503--32572550
16
2.7
19
73
20
50
47
0
8
43
1.33
32572763--32572819
21
2.7
21
78
15
64
42
0
0
57
0.98
32581262--32581429
40
4.2
40
79
3
160
23
26
23
27
2.00
32581278--32581427
80
1.9
80
83
8
198
22
26
24
27
1.99
32589663--32589833
93
1.8
93
93
0
297
28
29
20
21
1.98
32589655--32589830
46
3.8
46
79
12
207
29
28
19
21
1.98
32597512--32597836
173
1.9
173
86
1
472
31
9
21
37
1.85
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32603551--32603665
60
2.0
55
85
11
153
37
20
9
33
1.85
32611250--32611289
16
2.5
17
80
12
57
37
5
25
32
1.77
32611538--32611612
12
6.8
11
70
22
52
52
2
0
45
1.15
32611550--32611612
12
5.4
12
73
21
55
49
3
0
47
1.17
32611959--32612047
27
3.2
27
75
20
94
37
16
6
39
1.76
32616173--32616232
25
2.5
24
76
12
61
5
31
0
63
1.16
32616204--32616244
17
2.4
17
100
0
82
0
26
0
73
0.84
32620186--32620379
47
4.1
47
89
0
280
32
10
28
27
1.90
32620585--32620691
37
2.9
37
94
0
178
24
18
30
26
1.98
32625626--32625670
20
2.3
20
81
14
58
26
15
26
31
1.96
32626813--32626866
27
2.0
26
86
10
74
59
0
0
40
0.98
32628687--32628716
15
2.0
15
100
0
60
33
26
6
33
1.83
32629018--32629095
30
2.6
30
82
8
97
46
5
6
42
1.51
32630846--32630895
26
2.0
25
84
11
66
36
0
26
38
1.57
32640530--32640573
22
2.0
22
83
12
56
56
6
6
29
1.51
32640767--32640804
17
2.2
17
82
13
51
65
0
2
31
1.06
32642646--32642719
37
2.0
37
97
0
139
44
18
8
28
1.78
32652491--32652549
25
2.4
25
91
0
91
54
18
20
6
1.66
32652508--32652560
25
2.1
25
85
0
70
49
26
18
5
1.70
32662549--32662598
16
3.3
16
69
25
54
36
16
2
46
1.58
32665281--32665319
15
2.7
15
84
4
53
33
5
2
58
1.33
32666000--32666030
6
5.2
6
100
0
62
16
35
16
32
1.91
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32670040--32670575
133
4.1
132
82
5
566
34
18
19
27
1.95
32670098--32670575
264
1.8
263
81
6
599
33
19
19
27
1.96
32671697--32671725
2
14.5
2
100
0
58
51
0
0
48
1.00
32671842--32671870
2
14.5
2
100
0
58
51
0
0
48
1.00
32673129--32673163
19
1.9
19
88
11
56
11
14
5
68
1.37
32673631--32673699
33
2.1
33
83
2
86
8
18
1
71
1.20
32674176--32674272
48
2.0
48
92
4
160
29
9
23
37
1.86
32675126--32675194
22
3.2
22
64
25
56
37
8
15
37
1.79
32684127--32684169
21
2.2
18
84
12
50
34
0
0
65
0.93
32684919--32685127
41
5.2
40
86
3
253
33
19
25
21
1.96
32684919--32685127
82
2.6
81
88
4
289
33
19
25
21
1.96
32685392--32685486
46
2.1
46
97
0
181
34
4
5
55
1.42
32685411--32685483
23
3.2
23
64
14
60
34
4
5
56
1.42
32686318--32686589
43
6.3
43
81
5
300
25
27
21
26
1.99
32687849--32687878
14
2.1
14
93
0
51
76
3
0
20
0.92
32694419--32694474
26
2.2
26
100
0
112
30
7
26
35
1.83
32695953--32696005
26
2.0
26
85
7
72
37
22
15
24
1.92
32697889--32697925
13
2.8
13
91
0
65
83
0
8
8
0.80
32699036--32699355
64
5.0
64
95
0
568
31
18
13
36
1.90
32699818--32699916
43
2.2
45
80
3
121
30
14
23
32
1.94
32699626--32699905
146
1.9
145
91
0
452
31
15
25
28
1.95
32699763--32700159
176
2.3
173
82
4
478
30
16
24
28
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32711609--32711680
2
37.5
2
76
13
53
38
1
2
56
1.22
32711609--32711681
19
3.7
19
80
8
67
38
1
2
57
1.22
32711821--32711863
2
21.5
2
90
0
68
44
0
4
51
1.22
32711861--32711935
3
25.0
3
79
15
84
32
4
0
64
1.12
32711835--32711932
9
11.4
8
79
18
76
36
3
0
60
1.13
32724336--32725103
171
4.5
172
91
2
1195
29
16
31
22
1.96
32724340--32725103
297
2.5
301
87
4
1116
29
17
31
22
1.96
32724336--32725103
44
17.8
44
87
4
1084
29
16
31
22
1.96
32726518--32726571
25
2.2
25
83
6
65
27
5
0
66
1.13
32726874--32726939
21
3.0
21
80
4
60
37
0
3
59
1.13
32727125--32727192
3
22.0
3
82
11
84
30
4
1
63
1.23
32734742--32734883
40
3.5
40
83
1
124
27
23
26
22
1.99
32734781--32734909
40
3.2
39
84
6
152
24
22
27
25
2.00
32745018--32745411
44
9.0
44
93
0
664
28
17
32
21
1.96
32747163--32747231
13
5.5
13
77
19
67
37
1
2
57
1.22
32747409--32747488
3
26.3
3
82
12
101
31
3
1
63
1.20
32747409--32747488
23
3.6
22
83
14
94
31
3
1
63
1.20
32752988--32753073
44
2.0
44
85
0
118
31
20
17
30
1.96
32752747--32753071
176
1.8
176
84
2
447
31
21
16
30
1.95
32757234--32757268
17
2.1
18
89
10
56
48
2
0
48
1.16
32758608--32758646
19
2.0
20
90
5
62
69
10
2
17
1.28
32762543--32762590
21
2.2
23
88
7
73
20
10
6
62
1.49
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32764776--32764808
16
2.1
16
100
0
66
12
39
0
48
1.40
32769350--32769524
40
4.4
40
88
2
262
31
29
17
21
1.96
32777851--32778065
40
5.4
40
97
0
394
28
29
19
22
1.98
32782432--32782480
15
3.2
15
88
2
62
38
0
2
59
1.09
32784655--32785078
46
9.7
46
83
12
520
36
15
25
22
1.94
32784606--32785078
84
5.5
84
93
2
723
36
15
24
23
1.94
32784911--32785078
93
1.8
92
87
3
248
41
15
23
19
1.90
32785341--32785387
25
2.0
25
83
8
62
53
4
14
27
1.60
32787350--32787457
26
4.2
26
95
2
182
31
7
24
37
1.83
32794425--32794531
26
4.2
26
95
1
189
30
6
25
37
1.81

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402   403   404   405   406   407   408   409   410   411   412   413   414   415   416   
          417   418   419   420   421   422   423   424   425   426   427   428   429   430   431   432   
          433