Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: Chr06 132263754 
Parameters: 2 7 7 80 10 50 1000
Length:  132263754

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402   403   404   405   406   407   408   409   410   411   412   413   414   415   416   
          417   418   419   420   421   422   423   424   425   426   427   428   429   430   431   432   
          433   

This is table  104  of  433  ( 51894 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31912606--31913944
207
6.5
207
94
0
2300
29
17
23
29
1.97
31914344--31914424
17
4.6
17
87
6
117
39
11
12
37
1.78
31914336--31914424
35
2.5
36
90
3
153
39
10
13
37
1.78
31914351--31914433
19
4.4
20
76
18
65
40
8
14
36
1.76
31914338--31914430
17
5.3
17
69
20
66
39
9
13
36
1.78
31916055--31916231
27
6.6
27
80
3
178
32
15
19
32
1.93
31916050--31916233
81
2.3
82
80
5
203
33
14
20
32
1.93
31917202--31917235
12
2.8
12
86
4
50
14
20
2
61
1.46
31918286--31918364
24
3.3
24
80
7
81
17
20
22
39
1.92
31927379--31927427
20
2.5
20
86
6
64
51
10
0
38
1.36
31927391--31927431
20
2.0
20
100
0
82
43
14
0
41
1.45
31929737--31929784
21
2.3
21
85
7
62
33
52
2
12
1.51
31929921--31929963
21
2.1
20
87
12
61
48
20
11
18
1.79
31931477--31931586
26
4.2
26
95
0
166
36
22
6
34
1.80
31936397--31936439
12
3.6
12
96
0
77
13
48
25
11
1.77
31939552--31939661
26
4.2
26
96
0
175
36
23
5
34
1.78
31940390--31940514
63
2.0
63
93
0
214
36
20
11
32
1.88
31941606--31941662
28
2.0
28
93
0
96
24
7
22
45
1.77
31953082--31953120
18
2.2
18
90
4
62
23
7
2
66
1.30
31955813--31955943
47
2.8
47
83
0
163
46
15
13
24
1.82
31957072--31957157
24
3.5
24
73
3
73
29
24
17
29
1.97
31960711--31960870
27
5.9
27
77
10
148
37
21
21
19
1.94
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
31960711--31960870
54
3.0
54
87
3
207
37
21
21
19
1.94
31962884--31963415
48
11.0
48
93
0
893
31
25
6
37
1.80
31962884--31963415
144
3.7
144
97
0
983
31
25
6
37
1.80
31968780--31968830
5
9.4
5
80
16
57
70
0
7
21
1.12
31972988--31973074
34
2.5
35
81
10
99
31
6
16
45
1.73
31976250--31976310
30
2.0
30
87
0
86
29
24
4
40
1.76
31977791--31977862
30
2.4
30
93
4
119
43
12
27
16
1.84
31977851--31977922
30
2.4
30
88
0
99
38
11
23
26
1.88
31984990--31985014
12
2.1
12
100
0
50
32
0
0
68
0.90
31984990--31985031
21
2.0
20
82
13
50
30
4
0
64
1.14
31989961--31990105
40
3.7
40
78
9
145
24
22
26
25
2.00
31989961--31990112
79
1.9
80
81
6
184
25
22
27
25
2.00
31999619--31999910
50
5.9
50
82
5
358
24
29
17
28
1.97
32009195--32009267
38
1.9
38
94
0
128
47
16
4
31
1.65
32010277--32010429
58
2.7
57
81
7
175
52
13
9
24
1.69
32010269--32010453
57
3.2
55
76
11
165
50
12
9
27
1.71
32012758--32013059
46
6.7
46
86
4
391
23
23
12
40
1.89
32012796--32013059
87
2.9
90
89
5
390
24
24
13
38
1.91
32012796--32013060
133
2.0
133
90
0
422
24
24
13
38
1.91
32015224--32015257
2
17.0
2
100
0
68
50
0
0
50
1.00
32017463--32017518
18
3.1
18
76
5
58
50
3
1
44
1.29
32017463--32017542
37
2.1
37
82
11
92
48
5
2
43
1.38
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32017933--32017974
21
2.0
21
100
0
84
47
9
4
38
1.57
32020080--32020114
12
2.9
12
91
8
54
42
14
2
40
1.60
32030637--32030674
16
2.5
15
87
12
51
28
0
0
71
0.87
32035166--32035194
14
2.0
15
93
6
51
20
6
17
55
1.65
32035310--32035438
50
2.5
51
86
5
172
37
16
22
24
1.94
32035414--32035531
31
3.8
31
85
8
177
27
17
26
27
1.98
32035414--32035531
62
1.9
62
91
6
195
27
17
26
27
1.98
32035530--32035558
7
4.1
7
100
0
58
44
13
27
13
1.82
32035563--32035686
47
2.7
46
83
2
158
29
15
26
28
1.96
32035657--32035754
42
2.3
43
83
10
123
34
14
23
27
1.93
32037951--32038023
29
2.5
29
90
0
92
26
30
16
27
1.97
32052004--32052046
14
3.1
14
79
0
50
48
0
0
51
1.00
32054831--32054900
22
3.1
22
67
17
54
48
11
20
20
1.79
32054876--32054945
22
3.1
22
65
23
56
45
11
21
21
1.83
32054831--32054968
45
3.1
45
88
1
197
44
12
21
21
1.84
32063672--32063757
43
2.0
43
100
0
172
18
27
9
44
1.80
32069141--32069250
44
2.4
45
83
5
134
34
12
23
29
1.92
32073102--32073151
5
10.0
5
79
16
50
20
6
0
74
1.03
32075797--32075905
23
5.0
23
74
8
93
41
21
19
18
1.91
32075831--32075906
23
3.4
23
85
3
102
38
21
18
22
1.94
32076034--32076107
35
2.1
36
85
10
98
40
20
2
36
1.67
32076191--32076453
47
5.6
46
71
17
161
24
28
19
27
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32077981--32078085
21
4.8
21
88
2
120
34
27
22
15
1.94
32077979--32078076
42
2.3
42
85
3
133
34
26
23
15
1.94
32078044--32078098
23
2.4
23
96
0
101
36
21
20
21
1.95
32078197--32078252
23
2.4
24
91
8
98
26
26
3
42
1.71
32079017--32079067
25
2.1
24
85
7
68
35
9
9
45
1.71
32079505--32079544
11
3.1
14
76
23
52
22
5
0
72
1.04
32083032--32083258
113
2.0
113
97
0
427
31
26
16
25
1.96
32087212--32087530
46
6.8
48
76
10
241
23
30
19
26
1.98
32087357--32087530
94
1.9
92
85
4
242
21
29
21
27
1.99
32087212--32087530
140
2.2
143
82
7
373
23
30
19
26
1.98
32090500--32090526
2
13.5
2
100
0
54
51
0
0
48
1.00
32091888--32091917
13
2.3
13
94
0
51
50
0
26
23
1.50
32097528--32097680
43
3.6
43
73
13
127
32
24
18
23
1.97
32100794--32100965
93
1.8
93
93
0
299
22
20
28
28
1.99
32100800--32100964
46
3.6
46
73
8
163
22
20
28
28
1.99
32102594--32102626
2
16.5
2
100
0
66
48
0
0
51
1.00
32102640--32102673
10
3.3
10
84
8
50
38
2
0
58
1.13
32108215--32108325
55
2.0
55
98
0
213
33
21
9
35
1.87
32109081--32109109
2
14.5
2
100
0
58
48
0
0
51
1.00
32110145--32110183
21
1.9
19
85
10
51
7
23
5
64
1.40
32110393--32110443
23
2.3
23
89
3
77
60
5
9
23
1.50
32112161--32112309
60
2.5
59
83
9
169
26
26
20
26
1.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32114468--32114500
17
1.9
17
93
0
57
69
0
3
27
1.03
32119193--32119240
23
2.1
23
92
0
78
37
8
20
33
1.83
32120761--32120799
18
2.2
18
86
4
53
15
7
20
56
1.63
32125930--32125976
22
2.1
22
88
0
67
53
0
0
46
1.00
32125947--32125988
20
2.0
22
86
9
61
45
0
0
54
0.99
32127871--32127940
27
2.6
27
95
2
122
30
27
14
28
1.95
32135743--32135812
27
2.6
27
90
2
113
30
25
14
30
1.95
32143333--32143376
23
1.9
23
90
0
70
61
4
2
31
1.28
32143337--32143379
11
3.8
11
80
17
52
65
2
2
30
1.18
32143749--32143803
3
18.3
3
100
0
110
32
0
0
67
0.91
32149077--32149133
19
3.1
19
85
7
73
56
7
0
36
1.27
32149110--32149160
27
2.0
25
84
7
66
52
5
0
41
1.25
32149362--32149439
36
2.2
36
88
4
113
24
17
12
44
1.84
32149367--32149443
31
2.5
30
82
14
95
24
19
11
44
1.84
32149725--32149769
18
2.4
19
85
3
56
24
0
4
71
1.05
32150266--32150309
21
2.1
21
91
4
72
43
0
0
56
0.99
32155490--32155520
5
6.2
5
100
0
62
80
0
19
0
0.71
32157684--32157740
28
2.0
28
100
0
114
43
17
7
31
1.76
32171896--32171981
44
1.9
45
90
2
138
33
12
25
27
1.93
32175152--32175181
2
15.0
2
100
0
60
0
50
0
50
1.00
32182238--32182378
57
2.4
59
81
8
157
34
17
17
30
1.94
32183722--32183754
16
2.1
16
100
0
66
42
6
24
27
1.78
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32185551--32185584
5
6.8
5
96
0
59
55
2
0
41
1.15
32186311--32186370
18
3.3
18
83
9
77
61
0
1
36
1.06
32186311--32186370
9
6.6
9
85
11
68
61
0
1
36
1.06
32186316--32186375
17
3.4
17
78
19
61
65
0
1
33
1.03
32187419--32187466
19
2.5
19
86
6
62
60
2
0
37
1.09
32187419--32187466
20
2.6
18
83
12
53
60
2
0
37
1.09
32187536--32187579
21
2.1
21
86
0
61
68
4
0
27
1.09
32187855--32187933
39
2.0
39
90
0
122
35
24
5
35
1.77
32189172--32189217
17
2.7
17
86
6
58
73
4
0
21
1.00
32199608--32199653
17
2.7
17
86
6
58
73
4
0
21
1.00

Tables:   1   2   3   4   5   6   7   8   9   10   11   12   13   14   15   16   
          17   18   19   20   21   22   23   24   25   26   27   28   29   30   31   32   
          33   34   35   36   37   38   39   40   41   42   43   44   45   46   47   48   
          49   50   51   52   53   54   55   56   57   58   59   60   61   62   63   64   
          65   66   67   68   69   70   71   72   73   74   75   76   77   78   79   80   
          81   82   83   84   85   86   87   88   89   90   91   92   93   94   95   96   
          97   98   99   100   101   102   103   104   105   106   107   108   109   110   111   112   
          113   114   115   116   117   118   119   120   121   122   123   124   125   126   127   128   
          129   130   131   132   133   134   135   136   137   138   139   140   141   142   143   144   
          145   146   147   148   149   150   151   152   153   154   155   156   157   158   159   160   
          161   162   163   164   165   166   167   168   169   170   171   172   173   174   175   176   
          177   178   179   180   181   182   183   184   185   186   187   188   189   190   191   192   
          193   194   195   196   197   198   199   200   201   202   203   204   205   206   207   208   
          209   210   211   212   213   214   215   216   217   218   219   220   221   222   223   224   
          225   226   227   228   229   230   231   232   233   234   235   236   237   238   239   240   
          241   242   243   244   245   246   247   248   249   250   251   252   253   254   255   256   
          257   258   259   260   261   262   263   264   265   266   267   268   269   270   271   272   
          273   274   275   276   277   278   279   280   281   282   283   284   285   286   287   288   
          289   290   291   292   293   294   295   296   297   298   299   300   301   302   303   304   
          305   306   307   308   309   310   311   312   313   314   315   316   317   318   319   320   
          321   322   323   324   325   326   327   328   329   330   331   332   333   334   335   336   
          337   338   339   340   341   342   343   344   345   346   347   348   349   350   351   352   
          353   354   355   356   357   358   359   360   361   362   363   364   365   366   367   368   
          369   370   371   372   373   374   375   376   377   378   379   380   381   382   383   384   
          385   386   387   388   389   390   391   392   393   394   395   396   397   398   399   400   
          401   402   403   404   405   406   407   408   409   410   411   412   413   414   415   416   
          417   418   419   420   421   422   423   424   425   426   427   428   429   430   431   432   
          433